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Complete chloroplast genome of two Arabis L. species from Korea and assessment of their phylogenetic relationship in plastome based phylogeny
- Tamboli, Asif S.;
- Kadam, Suhas K.;
- Youn, Jin-Suk;
- Yang, JiYoung;
- Pak, Jae Hong;
- ... Choo, Yeon-Sik;
- 외 1명
WEB OF SCIENCE
1SCOPUS
2초록
Arabis stelleri DC. and A. takesimana Nakai belong to the family Brassicaceae. Arabis stelleri is widely distributed in East Asia, and A. takesimana is a Korean endemic plant. In this study, we report the complete chloroplast genomes of both species, measuring 153,577 bp for A. stelleri and 153,557 bp for A. takesimana. The plastome of A. stelleri comprises two inverted repeats (IRs) of 26,421 bp, a large singlecopy (LSC) region measuring 82,705 bp, and a small single-copy (SSC) region of 18,030 bp. Whereas A. takesimana has IR regions of 26,426 bp, an LSC of 82,694 bp, and an SSC of 18,011 bp. Both the plastomes contain 131 total genes, 86 protein-coding genes, 37 tRNA genes, 8 rRNA genes, and 36.4% GC content. The organization and gene content of both plastomes were found to be similar to previously reported Arabis plastomes. In addition, we have tested the phylogenetic position of both the Arabis species and the relationship of the genus Arabis with other Brassicaceae members in comprehensive family-level plastome-based phylogeny. Arabis stelleri and A. takesimana are phylogenetically placed within the Arabis clade and show a close relationship to A. flagellosa, A. nipponica, A. paniculata, and A. hirsuta. (c) 2024 National Science Museum of Korea (NSMK) and Korea National Arboretum (KNA), Publishing Services by Elsevier. This is an open access article under the CC BY-NC-ND license (http:// creativecommons.org/licenses/by-nc-nd/4.0/).
키워드
- 제목
- Complete chloroplast genome of two Arabis L. species from Korea and assessment of their phylogenetic relationship in plastome based phylogeny
- 저자
- Tamboli, Asif S.; Kadam, Suhas K.; Youn, Jin-Suk; Yang, JiYoung; Pak, Jae Hong; Oh, Sang-Hun; Choo, Yeon-Sik
- 발행일
- 2024-09-01
- 유형
- Article
- 권
- 17
- 호
- 3
- 페이지
- 457 ~ 463
- 언어
- ENG
- 출판사
- NATL SCIENCE MUSEUM & KOREAN NATL ARBORETUM
- 발행국가
- 대한민국
- 분량
- 7 페이지
- ISSN
- E 2287-9544
P 2287-884X