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Solvent Effects and pH Dependence of the X-ray Absorption Spectra of Proline from Electrostatic Embedding Quantum Mechanics/Molecular Mechanics and Mixed-Reference Spin-Flip Time-dependent Density-Functional Theory
- Alias-Rodriguez, Marc;
- Bonfrate, Simone;
- Park, Woojin;
- Ferre, Nicolas;
- Choi, Cheol Ho;
- 외 1명
WEB OF SCIENCE
8SCOPUS
9초록
The accurate description of solvent effects on X-ray absorption spectra (XAS) is fundamental for comparing the simulated spectra with experiments in solution. Currently, few protocols exist that can efficiently reproduce the effects of the solute/solvent interactions on XAS. Here, we develop an efficient and accurate theoretical protocol for simulating the solvent effects on XAS. The protocol combines electrostatic embedding QM/MM based on electrostatic potential fitted operators for describing the solute/solvent interactions and mixed-reference spin-flip time-dependent density functional theory (MRSF-TDDFT) for simulating accurate XAS spectra. To demonstrate the capabilities of our protocol, we compute the X-ray absorption of neutral proline in the gas phase and ionic proline in water in all relevant K-edges, showing excellent agreement with experiments. We show that states represented by core to pi* transitions are almost unaffected by the interaction with water, whereas the core to sigma* transitions are more impacted by the fluctuation of proline structure and the electrostatic interaction with the solvent. Finally, we reconstruct the pH-dependent XAS of proline in solution, determining that the N K-edge can be used to distinguish its three protonation states.
키워드
- 제목
- Solvent Effects and pH Dependence of the X-ray Absorption Spectra of Proline from Electrostatic Embedding Quantum Mechanics/Molecular Mechanics and Mixed-Reference Spin-Flip Time-dependent Density-Functional Theory
- 저자
- Alias-Rodriguez, Marc; Bonfrate, Simone; Park, Woojin; Ferre, Nicolas; Choi, Cheol Ho; Huix-Rotllant, Miquel
- 발행일
- 2023-11-29
- 유형
- Article
- 권
- 127
- 호
- 49
- 페이지
- 10382 ~ 10392
- 언어
- ENG
- 출판사
- AMER CHEMICAL SOC
- 발행국가
- 미국
- 분량
- 11 페이지
- ISSN
- E 1520-5215
P 1089-5639